Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hydrogenase 4 catalytic subunit hyfg | CI641_005330 | Not Available | Positive | 1109860 - 1111575 | 65076.1 |
| hydrogenase 4 subunit h | CI641_005335 | Not Available | Positive | 1111585 - 1112130 | 20245.5 |
| formate hydrogenlyase maturation protein hych | CI641_005345 | Not Available | Positive | 1112877 - 1113290 | 15546.7 |
| sigma-54-dependent fis family transcriptional regulator | CI641_005350 | Not Available | Positive | 1113320 - 1115332 | 75350.7 |
| formate transporter | CI641_005355 | Not Available | Positive | 1115354 - 1116202 | 30512.3 |
| ai-2e family transporter | CI641_005360 | Not Available | Negative | 1116240 - 1117301 | 39196.9 |
| beta-barrel assembly-enhancing protease | CI641_005365 | Not Available | Positive | 1117514 - 1118977 | 53911.1 |
| arsenate reductase (glutaredoxin) | CI641_005370 | Not Available | Positive | 1118998 - 1119357 | 13417.4 |
| dnaa inactivator hda | CI641_005375 | Not Available | Negative | 1119495 - 1120241 | 28371.4 |
| uracil permease | CI641_005380 | Not Available | Negative | 1120291 - 1121580 | 45063.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





