Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oxalyl-coa decarboxylase | CI641_004760 | Not Available | Negative | 999601 - 1001295 | 60540.8 |
| formyl-coa transferase | CI641_004765 | Not Available | Negative | 1001349 - 1002599 | 45860.7 |
| yfdx family protein | CI641_004770 | Not Available | Negative | 1003112 - 1003744 | 22907.4 |
| colanic acid biosynthesis lipoprotein ypdi | CI641_004775 | Not Available | Positive | 1004040 - 1004315 | 10210.5 |
| duf2545 family protein | CI641_004780 | Not Available | Negative | 1004392 - 1004634 | 8923.5 |
| kdo(2)-lipid iv(a) palmitoleoyltransferase | CI641_004785 | Not Available | Positive | 1004987 - 1005907 | 35495.5 |
| membrane protein ypdk | CI641_004790 | Not Available | Positive | 1006263 - 1006334 | 2704.57 |
| alanine transaminase | CI641_004795 | Not Available | Negative | 1006399 - 1007637 | 46218.8 |
| sensor histidine kinase | CI641_004800 | Not Available | Positive | 1008014 - 1009711 | 62661.3 |
| response regulator transcription factor | CI641_004805 | Not Available | Positive | 1009726 - 1010460 | 28722.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





