Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| response regulator inhibitor tori | CI641_004710 | Not Available | Positive | 985655 - 985855 | 7678.32 |
| dna-binding transcriptional regulator dsdc | CI641_004715 | Not Available | Negative | 986039 - 986974 | 35352.2 |
| d-serine transporter dsdx | CI641_004720 | Not Available | Positive | 987192 - 988529 | 47140.1 |
| d-serine ammonia-lyase | CI641_004725 | Not Available | Positive | 988547 - 989875 | 47873.3 |
| multidrug efflux mfs transporter permease subunit emry | CI641_004730 | Not Available | Negative | 989983 - 991521 | 56018.5 |
| multidrug efflux mfs transporter periplasmic adaptor subunit emrk | CI641_004735 | Not Available | Negative | 991521 - 992684 | 42587.9 |
| acid-sensing system dna-binding response regulator evga | CI641_004740 | Not Available | Positive | 993100 - 993714 | 22691.5 |
| acid-sensing system histidine kinase evgs | CI641_004745 | Not Available | Positive | 993719 - 997312 | 134837.0 |
| acetyl-coa--oxalate coa-transferase | CI641_004750 | Not Available | Negative | 997368 - 998513 | 41673.2 |
| transporter yfdv | CI641_004755 | Not Available | Negative | 998587 - 999531 | 33617.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





