Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-arg | Not Available | Not Available | Positive | 975416 - 975490 | Not Available |
| prophage integrase ints | CI641_004650 | Not Available | Positive | 975652 - 976809 | 44147.6 |
| hypothetical protein | CI641_004655 | Not Available | Negative | 976740 - 976964 | 8481.5 |
| arac family transcriptional regulator | CI641_004660 | Not Available | Negative | 977044 - 977958 | 33903.1 |
| iron-containing alcohol dehydrogenase | CI641_004665 | Not Available | Positive | 978222 - 979370 | 41359.4 |
| alpha/beta hydrolase | CI641_004670 | Not Available | Positive | 979391 - 980488 | 40453.4 |
| ggdef domain-containing protein | CI641_004675 | Not Available | Positive | 981041 - 982372 | 51544.0 |
| hypothetical protein | CI641_004690 | Not Available | Negative | 983208 - 983738 | 20267.5 |
| hypothetical protein | CI641_004695 | Not Available | Negative | 983629 - 983832 | 7739.51 |
| hypothetical protein | CI641_004705 | Not Available | Positive | 985175 - 985519 | 12788.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





