Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nadh-quinone oxidoreductase subunit b | CI641_004345 | Not Available | Negative | 912978 - 913640 | 25057.3 |
| nadh-quinone oxidoreductase subunit nuoa | CI641_004350 | Not Available | Negative | 913656 - 914099 | 16458.2 |
| transcriptional regulator lrha | CI641_004355 | Not Available | Negative | 914730 - 915668 | 34581.8 |
| pyridoxal phosphate-dependent aminotransferase | CI641_004360 | Not Available | Positive | 916588 - 917805 | 45519.9 |
| 5'-deoxynucleotidase | CI641_004365 | Not Available | Positive | 917889 - 918488 | 22695.3 |
| slc13 family permease | CI641_004370 | Not Available | Negative | 918547 - 920379 | 65876.0 |
| hexitol phosphatase hpxa | CI641_004375 | Not Available | Negative | 920466 - 921116 | 23035.9 |
| yfbu family protein | CI641_004380 | Not Available | Negative | 921127 - 921621 | 19537.4 |
| duf412 domain-containing protein | CI641_004385 | Not Available | Negative | 921704 - 922159 | 17214.1 |
| acetate kinase | CI641_004390 | Not Available | Positive | 922497 - 923699 | 43293.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





