Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-4-amino-4-deoxy-l-arabinose aminotransferase | CI641_004190 | Not Available | Positive | 879312 - 880451 | 41643.2 |
| undecaprenyl-phosphate 4-deoxy-4-formamido-l-arabinose transferase | CI641_004195 | Not Available | Positive | 880455 - 881423 | 36341.3 |
| bifunctional udp-4-amino-4-deoxy-l-arabinose formyltransferase/udp-glucuronic acid oxidase arna | CI641_004200 | Not Available | Positive | 881423 - 883405 | 74211.1 |
| 4-deoxy-4-formamido-l-arabinose- phosphoundecaprenol deformylase | CI641_004205 | Not Available | Positive | 883402 - 884292 | 33113.6 |
| lipid iv(a) 4-amino-4-deoxy-l-arabinosyltransferase | CI641_004210 | Not Available | Positive | 884292 - 885944 | 62545.9 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arne | CI641_004215 | Not Available | Positive | 885941 - 886276 | 12192.7 |
| 4-amino-4-deoxy-l-arabinose-phosphoundecaprenol flippase subunit arnf | CI641_004220 | Not Available | Positive | 886276 - 886662 | 14068.0 |
| signal transduction protein pmrd | CI641_004225 | Not Available | Negative | 886656 - 886922 | 9815.9 |
| o-succinylbenzoate--coa ligase | CI641_004230 | Not Available | Negative | 887032 - 888387 | 50115.4 |
| o-succinylbenzoate synthase | CI641_004235 | Not Available | Negative | 888384 - 889346 | 35470.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





