Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1175 domain-containing protein | CI641_004085 | Not Available | Negative | 851941 - 852564 | 23730.5 |
| duf2138 domain-containing protein | CI641_004090 | Not Available | Negative | 852561 - 854249 | 62598.7 |
| dna topoisomerase (atp-hydrolyzing) subunit a | CI641_004095 | Not Available | Negative | 854398 - 857025 | 96994.4 |
| bifunctional 3-demethylubiquinone 3-o-methyltransferase/2-octaprenyl-6-hydroxy phenol methylase | CI641_004100 | Not Available | Positive | 857172 - 857894 | 26557.0 |
| aida-i family autotransporter yfal | CI641_004105 | Not Available | Negative | 858022 - 861756 | 130482.0 |
| ribonucleoside-diphosphate reductase subunit alpha | CI641_004110 | Not Available | Positive | 862452 - 864737 | 85722.9 |
| ribonucleotide-diphosphate reductase subunit beta | CI641_004115 | Not Available | Positive | 864826 - 865956 | 43503.6 |
| ferredoxin-like diferric-tyrosyl radical cofactor maintenance protein yfae | CI641_004120 | Not Available | Positive | 865956 - 866210 | 9293.29 |
| lipopolysaccharide kinase inaa | CI641_004125 | Not Available | Negative | 866264 - 866914 | 25297.4 |
| glycerophosphodiester phosphodiesterase | CI641_004135 | Not Available | Negative | 867377 - 868453 | 40858.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





