Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| duf1414 domain-containing protein | CI641_003880 | Not Available | Positive | 802168 - 802395 | 8288.95 |
| cardiolipin transport protein pbga | CI641_003885 | Not Available | Positive | 802415 - 804175 | 67285.8 |
| Trna-pro | Not Available | Not Available | Positive | 804250 - 804326 | Not Available |
| nitrate/nitrite response regulator protein narp | CI641_003900 | Not Available | Positive | 807341 - 807988 | 23636.5 |
| cytochrome c-type biogenesis protein ccmh | CI641_003905 | Not Available | Negative | 808023 - 809075 | 39049.2 |
| thiol:disulfide interchange protein dsbe | CI641_003910 | Not Available | Negative | 809072 - 809629 | 20810.1 |
| heme lyase ccmf/nrfe family subunit | CI641_003915 | Not Available | Negative | 809626 - 811569 | 71423.7 |
| cytochrome c maturation protein ccme | CI641_003920 | Not Available | Negative | 811566 - 812045 | 17699.4 |
| heme exporter protein ccmd | CI641_003925 | Not Available | Negative | 812042 - 812251 | 7745.59 |
| heme exporter protein ccmc | CI641_003930 | Not Available | Negative | 812248 - 812985 | 27886.9 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





