Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| abc transporter substrate-binding protein | CI641_003830 | Not Available | Positive | 790403 - 792217 | 69713.6 |
| microcin c abc transporter permease yejb | CI641_003835 | Not Available | Positive | 792218 - 793312 | 40376.6 |
| abc transporter permease | CI641_003840 | Not Available | Positive | 793312 - 794337 | 38094.6 |
| microcin c abc transporter atp-binding protein yejf | CI641_003845 | Not Available | Positive | 794339 - 795928 | 58743.8 |
| hypothetical protein | CI641_003850 | Not Available | Negative | 795932 - 796276 | 12525.9 |
| multidrug efflux mfs transporter bcr | CI641_003855 | Not Available | Negative | 796609 - 797799 | 43355.4 |
| 16s rrna pseudouridine(516) synthase rsua | CI641_003860 | Not Available | Negative | 797827 - 798522 | 25866.8 |
| dead/deah box helicase | CI641_003865 | Not Available | Positive | 798671 - 800431 | 66618.1 |
| 50s ribosomal protein l25 | CI641_003870 | Not Available | Positive | 800556 - 800840 | 10694.0 |
| nucleoid-associated protein yejk | CI641_003875 | Not Available | Negative | 800979 - 801986 | 37825.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





