Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Enterobacterales
Family
Enterobacteriaceae
Genus
Escherichia
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Enterobacterales |
| Family | Enterobacteriaceae |
| Genus | Escherichia |
| Species | Escherichia coli |
| Strain | strain ECCTRPRTH03 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Negative |
| Shape | Rod |
| Mobility | Yes |
| Flagellar presence | Yes |
| Number of membranes | 2 |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Facultative anaerobe |
| Optimal temperature | 37 |
| Temperature range | Mesophilic |
| Habitat | HostAssociated |
| Biotic relationship | Free living |
| Host(s) | Homo sapiens, Gallus gallus, Bos taurus |
| Cell arrangement | Pairs - Singles |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Human |
Gene Summary
Adenine Count
Not Available
Thymine Count
Not Available
Guanine Count
Not Available
Cytosine Count
Not Available
Genome Length
Not Available
Protein-coding Genes
5034 genes
Non-Coding Genes
300 genes
# of Chromosomes/Plasmids
2
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| yeih family protein | CI641_003730 | Not Available | Positive | 767809 - 768858 | 36884.3 |
| deoxyribonuclease iv | CI641_003735 | Not Available | Positive | 768932 - 769789 | 31493.3 |
| sugar kinase | CI641_003740 | Not Available | Positive | 769792 - 770880 | 39666.5 |
| nupc/nupg family nucleoside cnt transporter | CI641_003745 | Not Available | Negative | 770936 - 772186 | 43382.2 |
| ribosylpyrimidine nucleosidase | CI641_003750 | Not Available | Negative | 772286 - 773227 | 33768.1 |
| transcriptional regulator yeil | CI641_003755 | Not Available | Positive | 773357 - 774055 | 26931.7 |
| nupc/nupg family nucleoside cnt transporter | CI641_003760 | Not Available | Negative | 774123 - 775373 | 43434.4 |
| pseudouridine-5'-phosphate glycosidase | CI641_003765 | Not Available | Negative | 775467 - 776405 | 32961.9 |
| pseudouridine kinase | CI641_003770 | Not Available | Negative | 776393 - 777334 | 33674.0 |
| pts fructose transporter subunit iibc | CI641_003775 | Not Available | Negative | 777758 - 779449 | 57552.7 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
| Health Condition | Relation | Reference |
|---|---|---|
| Gi disease | Causes | PMC11149725 |
| Utis | Causes | PMC11434687 |
| Colorectal cancer | Causes | PMC12198655 |
| Pyogenic liver abscesses | Causes | PMC12392612 |
| Uti | Causes | PMC13014981 |
| Colibacillosis | Causes | PMC13255289 |
| Enteric infections | Causes | PMC13255289 |
| Foodborne infections | Causes | PMC13255289 |
| Clinical mastitis | Causes | PMC13293316 |
| Diarrhea | Causes | PMC3035056 |





