Microbacterium sp. Yaish 1

Rod

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Micrococcales

Family

Microbacteriaceae

Genus

Microbacterium

Description

Microbacterium sp. Yaish 1 is a rod-shaped bacterium characterized by a single replicon, which indicates a streamlined genetic architecture. This organism has been cataloged with the accession number NPMR00000000.1, providing a reference point for genomic studies and further research. The rod shape of Microbacterium sp. Yaish 1 is typical of members within the Microbacterium genus, which are often found in diverse environments, including soil, water, and plant-associated habitats. This morphological trait may be linked to its adaptability and ecological roles within various ecosystems. The presence of a single replicon suggests that Microbacterium sp. Yaish 1 may possess a simpler genetic management system compared to organisms with multiple replicons. This can influence its replication rate and genetic stability, potentially impacting its ecological interactions and survival strategies. In summary, Microbacterium sp. Yaish 1, with its rod shape and singular replicon, exhibits characteristics that could contribute to its adaptability in diverse environments. Understanding its genomic structure and ecological role further enhances our knowledge of microbial diversity and the functional significance of bacteria within their ecosystems.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderMicrococcales
FamilyMicrobacteriaceae
GenusMicrobacterium
SpeciesMicrobacterium sp. Yaish 1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeRod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Microbacterium sp. Yaish 1 contig3, whole genome shotgun sequence.

Gene Summary

Adenine Count

508462 bp

Thymine Count

504139 bp

Guanine Count

1193175 bp

Cytosine Count

1202892 bp

Genome Length

3408671 bp

Protein-coding Genes

3099 genes

Non-Coding Genes

81 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
guab1 family imp dehydrogenase-related proteinCI089_02365Not AvailableNegative465252 - 46670950290.1
2-oxoglutarate dehydrogenase e1 componentCI089_02370Not AvailablePositive466941 - 470639134705.0
alpha-ketoglutarate decarboxylaseCI089_02375Not AvailableNegative470737 - 4709859339.93
rna polymerase subunit sigmaCI089_02380Not AvailableNegative470982 - 47163524380.8
3-phosphoshikimate 1-carboxyvinyltransferaseCI089_02385Not AvailablePositive471702 - 47304547070.4
ribosome small subunit-dependent gtpase aCI089_02390Not AvailablePositive473042 - 47412138448.5
thioredoxin-dependent thiol peroxidaseCI089_02395Not AvailablePositive474118 - 47458517202.3
histidine kinaseCI089_02400Not AvailableNegative474602 - 47498812612.6
whib family transcriptional regulatorCI089_02405Not AvailablePositive475210 - 4754589043.72
atpaseCI089_02410Not AvailableNegative475529 - 47702254228.2

Displaying genes 471 – 480 of 3180 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.