Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium carnosum |
| Strain | strain TMW 2.2021 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394574 bp
Thymine Count
1410666 bp
Guanine Count
884433 bp
Cytosine Count
869870 bp
Genome Length
4559543 bp
Protein-coding Genes
3998 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| 3-deoxy-7-phosphoheptulonate synthase | CIK00_20095 | Not Available | Positive | 4359608 - 4360678 | 39011.6 |
| bifunctional chorismate mutase/prephenate dehydrogenase | CIK00_20100 | Not Available | Positive | 4360726 - 4361853 | 42291.3 |
| chorismate mutase | CIK00_20105 | Not Available | Negative | 4361957 - 4363135 | 43901.7 |
| ribosomal subunit interface protein | CIK00_20110 | Not Available | Negative | 4363287 - 4363661 | 14107.8 |
| outer membrane protein assembly factor bamd | CIK00_20115 | Not Available | Negative | 4364052 - 4364780 | 27974.3 |
| 23s rrna pseudouridine(1911/1915/1917) synthase | CIK00_20120 | Not Available | Positive | 4364953 - 4365927 | 37027.9 |
| hypothetical protein | CIK00_20125 | Not Available | Positive | 4365927 - 4366655 | 26424.6 |
| atp-dependent chaperone clpb | CIK00_20130 | Not Available | Positive | 4366812 - 4369391 | 96001.2 |
| hypothetical protein | CIK00_20140 | Not Available | Positive | 4370480 - 4370929 | 17445.2 |
| hypothetical protein | CIK00_20145 | Not Available | Positive | 4371016 - 4371327 | 11916.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


