Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium carnosum |
| Strain | strain TMW 2.2021 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394574 bp
Thymine Count
1410666 bp
Guanine Count
884433 bp
Cytosine Count
869870 bp
Genome Length
4559543 bp
Protein-coding Genes
3998 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| recombination-associated protein rdgc | CIK00_19950 | Not Available | Positive | 4328727 - 4329641 | 34560.6 |
| metal ion permease | CIK00_19955 | Not Available | Negative | 4329776 - 4331281 | 54749.4 |
| u32 family peptidase | CIK00_19960 | Not Available | Positive | 4331600 - 4332988 | 52183.1 |
| ferredoxin | CIK00_19965 | Not Available | Positive | 4332994 - 4333248 | 9418.17 |
| penicillin-insensitive murein endopeptidase | CIK00_19970 | Not Available | Negative | 4333341 - 4334150 | 30084.7 |
| sulfate abc transporter substrate-binding protein | CIK00_19975 | Not Available | Positive | 4335083 - 4335670 | 21267.3 |
| formate dehydrogenase-n subunit alpha | CIK00_19980 | Not Available | Positive | 4335719 - 4338097 | 88046.9 |
| formate dehydrogenase subunit beta | CIK00_19985 | Not Available | Positive | 4338101 - 4338976 | 31932.1 |
| formate dehydrogenase subunit gamma | CIK00_19990 | Not Available | Positive | 4338973 - 4339608 | 24067.8 |
| formate dehydrogenase accessory protein fdhe | CIK00_19995 | Not Available | Positive | 4339710 - 4340600 | 33314.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


