Photobacterium carnosum strain TMW 2.2021

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium carnosum strain TMW 2.2021 is characterized by the presence of flagella, which are critical for its motility and environmental adaptability. This feature suggests that the strain is capable of moving toward favorable conditions and away from adverse ones, potentially influencing its ecological role in marine environments. The strain contains a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and cellular processes. This simplicity in genetic arrangement can be advantageous for survival in fluctuating environments, as it may allow for quicker responses to changes in nutrient availability or other environmental stresses. The strain is cataloged under the accession NPIB00000000.1, which provides a reference for researchers seeking genetic and functional information. This accession number serves as a unique identifier for the strain, ensuring that data associated with it can be reliably accessed and utilized in further studies. In terms of ecological insight, the presence of flagella in Photobacterium carnosum strain TMW 2.2021 likely enhances its ability to inhabit diverse niches within the marine ecosystem. Its motility may play a significant role in nutrient cycling and interactions with other microbial communities, thereby contributing to the overall dynamics of marine microbiomes. Understanding such traits can inform studies on microbial ecology and the functional roles of bacteria in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium carnosum
Strainstrain TMW 2.2021

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium carnosum strain TMW 2.2021

Gene Summary

Adenine Count

1394574 bp

Thymine Count

1410666 bp

Guanine Count

884433 bp

Cytosine Count

869870 bp

Genome Length

4559543 bp

Protein-coding Genes

3998 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ai-2e family transporterCIK00_18635Not AvailablePositive4036288 - 403735839171.3
thioredoxin-dependent thiol peroxidaseCIK00_18640Not AvailableNegative4037434 - 403789817428.0
glycine cleavage system transcriptional repressorCIK00_18645Not AvailableNegative4037972 - 403850819808.6
4-hydroxy-tetrahydrodipicolinate synthaseCIK00_18650Not AvailablePositive4038868 - 403974631044.5
outer membrane protein assembly factor bamcCIK00_18655Not AvailablePositive4039798 - 404080837632.9
lipoyl synthaseCIK00_18660Not AvailableNegative4040892 - 404186336472.1
octanoyltransferaseCIK00_18665Not AvailableNegative4041860 - 404251024299.1
hypothetical proteinCIK00_18670Not AvailableNegative4042732 - 404301310386.5
d-alanyl-d-alanine carboxypeptidaseCIK00_18675Not AvailableNegative4043230 - 404440242907.7
septal ring lytic transglycosylase rlpaCIK00_18680Not AvailableNegative4044633 - 404552333387.5

Displaying genes 3661 – 3670 of 4133 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.