Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium carnosum |
| Strain | strain TMW 2.2021 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394574 bp
Thymine Count
1410666 bp
Guanine Count
884433 bp
Cytosine Count
869870 bp
Genome Length
4559543 bp
Protein-coding Genes
3998 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gamma carbonic anhydrase family protein | CIK00_15935 | Not Available | Positive | 3462099 - 3462635 | 19356.6 |
| transcriptional regulator | CIK00_15940 | Not Available | Negative | 3462657 - 3462923 | 10087.6 |
| shikimate dehydrogenase | CIK00_15945 | Not Available | Negative | 3462931 - 3463752 | 29654.7 |
| coproporphyrinogen iii oxidase | CIK00_15950 | Not Available | Negative | 3463833 - 3464753 | 35180.1 |
| trna threonylcarbamoyladenosine biosynthesis protein rimn | CIK00_15955 | Not Available | Negative | 3464757 - 3465314 | 19981.0 |
| 5-(carboxyamino)imidazole ribonucleotide mutase | CIK00_15960 | Not Available | Positive | 3465509 - 3465997 | 16862.5 |
| 5-(carboxyamino)imidazole ribonucleotide synthase | CIK00_15965 | Not Available | Positive | 3465997 - 3467115 | 40391.0 |
| dna topoisomerase | CIK00_15970 | Not Available | Negative | 3467178 - 3467738 | 21161.4 |
| hypothetical protein | CIK00_15975 | Not Available | Negative | 3467741 - 3468214 | 18301.8 |
| dna-protecting protein dpra | CIK00_15980 | Not Available | Negative | 3468217 - 3469317 | 39265.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


