Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium carnosum |
| Strain | strain TMW 2.2021 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394574 bp
Thymine Count
1410666 bp
Guanine Count
884433 bp
Cytosine Count
869870 bp
Genome Length
4559543 bp
Protein-coding Genes
3998 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| holliday junction branch migration protein ruva | CIK00_01330 | Not Available | Negative | 298268 - 298891 | 22550.5 |
| crossover junction endodeoxyribonuclease ruvc | CIK00_01335 | Not Available | Negative | 299039 - 299560 | 18303.5 |
| aspartate--trna ligase | CIK00_01340 | Not Available | Negative | 299760 - 301541 | 66564.9 |
| carboxy-s-adenosyl-l-methionine synthase cmoa | CIK00_01345 | Not Available | Positive | 302331 - 303059 | 27385.8 |
| trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmob | CIK00_01350 | Not Available | Positive | 303076 - 304050 | 37474.9 |
| hypothetical protein | CIK00_01355 | Not Available | Positive | 304137 - 304943 | 30161.2 |
| gonadoliberin iii | CIK00_01360 | Not Available | Positive | 304958 - 306472 | 55870.7 |
| alpha-l-glutamate ligase-like protein | CIK00_01365 | Not Available | Positive | 306476 - 307450 | 35517.1 |
| hypothetical protein | CIK00_01370 | Not Available | Positive | 307586 - 308095 | 18916.7 |
| hypothetical protein | CIK00_01375 | Not Available | Positive | 308318 - 309007 | 25158.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


