Photobacterium carnosum strain TMW 2.2021

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium carnosum strain TMW 2.2021 is characterized by the presence of flagella, which are critical for its motility and environmental adaptability. This feature suggests that the strain is capable of moving toward favorable conditions and away from adverse ones, potentially influencing its ecological role in marine environments. The strain contains a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and cellular processes. This simplicity in genetic arrangement can be advantageous for survival in fluctuating environments, as it may allow for quicker responses to changes in nutrient availability or other environmental stresses. The strain is cataloged under the accession NPIB00000000.1, which provides a reference for researchers seeking genetic and functional information. This accession number serves as a unique identifier for the strain, ensuring that data associated with it can be reliably accessed and utilized in further studies. In terms of ecological insight, the presence of flagella in Photobacterium carnosum strain TMW 2.2021 likely enhances its ability to inhabit diverse niches within the marine ecosystem. Its motility may play a significant role in nutrient cycling and interactions with other microbial communities, thereby contributing to the overall dynamics of marine microbiomes. Understanding such traits can inform studies on microbial ecology and the functional roles of bacteria in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium carnosum
Strainstrain TMW 2.2021

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium carnosum strain TMW 2.2021


Gene Summary

Adenine Count

1394574 bp

Thymine Count

1410666 bp

Guanine Count

884433 bp

Cytosine Count

869870 bp

Genome Length

4559543 bp

Protein-coding Genes

3998 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
holliday junction branch migration protein ruvaCIK00_01330Not AvailableNegative298268 - 29889122550.5
crossover junction endodeoxyribonuclease ruvcCIK00_01335Not AvailableNegative299039 - 29956018303.5
aspartate--trna ligaseCIK00_01340Not AvailableNegative299760 - 30154166564.9
carboxy-s-adenosyl-l-methionine synthase cmoaCIK00_01345Not AvailablePositive302331 - 30305927385.8
trna 5-methoxyuridine(34)/uridine 5-oxyacetic acid(34) synthase cmobCIK00_01350Not AvailablePositive303076 - 30405037474.9
hypothetical proteinCIK00_01355Not AvailablePositive304137 - 30494330161.2
gonadoliberin iiiCIK00_01360Not AvailablePositive304958 - 30647255870.7
alpha-l-glutamate ligase-like proteinCIK00_01365Not AvailablePositive306476 - 30745035517.1
hypothetical proteinCIK00_01370Not AvailablePositive307586 - 30809518916.7
hypothetical proteinCIK00_01375Not AvailablePositive308318 - 30900725158.1

Displaying genes 271 – 280 of 4133 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.