Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium carnosum |
| Strain | strain TMW 2.2021 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394574 bp
Thymine Count
1410666 bp
Guanine Count
884433 bp
Cytosine Count
869870 bp
Genome Length
4559543 bp
Protein-coding Genes
3998 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| nad-dependent malic enzyme | CIK00_13545 | Not Available | Positive | 2971884 - 2973599 | 63215.4 |
| d-ribose pyranase | CIK00_13550 | Not Available | Positive | 2973974 - 2974393 | 15224.4 |
| ribokinase | CIK00_13555 | Not Available | Positive | 2974450 - 2975376 | 32847.3 |
| l-fucose:h+ symporter permease | CIK00_13560 | Not Available | Positive | 2975422 - 2976744 | 48438.6 |
| duf4432 domain-containing protein | CIK00_13565 | Not Available | Positive | 2976799 - 2977815 | 38374.3 |
| ribokinase | CIK00_13570 | Not Available | Positive | 2977977 - 2978897 | 32170.5 |
| transcriptional repressor purr | CIK00_13575 | Not Available | Positive | 2978930 - 2979952 | 37933.6 |
| hypothetical protein | CIK00_13580 | Not Available | Positive | 2980654 - 2980950 | 10992.8 |
| 2-dehydro-3-deoxyphosphogluconate aldolase | CIK00_13585 | Not Available | Positive | 2981379 - 2982023 | 22901.3 |
| type 1 glutamine amidotransferase domain-containing protein | CIK00_13590 | Not Available | Negative | 2982181 - 2982864 | 24498.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


