Photobacterium carnosum strain TMW 2.2021

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Vibrionales

Family

Vibrionaceae

Genus

Photobacterium

Description

Photobacterium carnosum strain TMW 2.2021 is characterized by the presence of flagella, which are critical for its motility and environmental adaptability. This feature suggests that the strain is capable of moving toward favorable conditions and away from adverse ones, potentially influencing its ecological role in marine environments. The strain contains a single replicon, indicating a streamlined genomic organization that may facilitate efficient replication and cellular processes. This simplicity in genetic arrangement can be advantageous for survival in fluctuating environments, as it may allow for quicker responses to changes in nutrient availability or other environmental stresses. The strain is cataloged under the accession NPIB00000000.1, which provides a reference for researchers seeking genetic and functional information. This accession number serves as a unique identifier for the strain, ensuring that data associated with it can be reliably accessed and utilized in further studies. In terms of ecological insight, the presence of flagella in Photobacterium carnosum strain TMW 2.2021 likely enhances its ability to inhabit diverse niches within the marine ecosystem. Its motility may play a significant role in nutrient cycling and interactions with other microbial communities, thereby contributing to the overall dynamics of marine microbiomes. Understanding such traits can inform studies on microbial ecology and the functional roles of bacteria in aquatic environments.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderVibrionales
FamilyVibrionaceae
GenusPhotobacterium
SpeciesPhotobacterium carnosum
Strainstrain TMW 2.2021

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Photobacterium carnosum strain TMW 2.2021

Gene Summary

Adenine Count

1394574 bp

Thymine Count

1410666 bp

Guanine Count

884433 bp

Cytosine Count

869870 bp

Genome Length

4559543 bp

Protein-coding Genes

3998 genes

Non-Coding Genes

135 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ribonuclease e inhibitor bCIK00_12890Not AvailablePositive2818379 - 281877714815.7
beta-mannosidaseCIK00_12895Not AvailablePositive2818980 - 282141593818.9
hypothetical proteinCIK00_12900Not AvailableNegative2821523 - 282193615584.5
valine--trna ligaseCIK00_12905Not AvailableNegative2822132 - 2824993108013.0
dna polymerase iii subunit chiCIK00_12910Not AvailableNegative2825032 - 282547216321.3
leucyl aminopeptidaseCIK00_12915Not AvailableNegative2825520 - 282702854433.7
lps export abc transporter permease lptfCIK00_12920Not AvailablePositive2827224 - 282832440255.0
lipopolysaccharide abc transporter permease lptgCIK00_12925Not AvailablePositive2828324 - 282939739446.8
hypothetical proteinCIK00_12930Not AvailableNegative2829461 - 282995518343.8
Trna-leuNot AvailableNot AvailablePositive2830195 - 2830279Not Available

Displaying genes 2541 – 2550 of 4133 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.