Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium carnosum |
| Strain | strain TMW 2.2021 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394574 bp
Thymine Count
1410666 bp
Guanine Count
884433 bp
Cytosine Count
869870 bp
Genome Length
4559543 bp
Protein-coding Genes
3998 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| oligopeptide transporter permease | CIK00_09640 | Not Available | Positive | 2078112 - 2079032 | 33650.3 |
| peptide abc transporter permease | CIK00_09645 | Not Available | Positive | 2079049 - 2079960 | 33543.6 |
| oligopeptide abc transporter atp-binding protein oppf | CIK00_09655 | Not Available | Positive | 2081078 - 2082064 | 36223.8 |
| adenylosuccinate lyase | CIK00_09660 | Not Available | Negative | 2082211 - 2083578 | 51389.5 |
| lysogenization regulator hfld | CIK00_09665 | Not Available | Negative | 2083667 - 2084284 | 22487.5 |
| trna 2-thiouridine(34) synthase mnma | CIK00_09670 | Not Available | Negative | 2084299 - 2085414 | 41609.4 |
| 23s rrna pseudouridine(2457) synthase | CIK00_09675 | Not Available | Negative | 2085789 - 2086439 | 24474.5 |
| isocitrate dehydrogenase (nadp(+)) | CIK00_09680 | Not Available | Positive | 2086583 - 2087836 | 45762.0 |
| cold shock domain protein cspd | CIK00_09685 | Not Available | Negative | 2088382 - 2088603 | 7998.39 |
| atp-dependent clp protease adapter clps | CIK00_09690 | Not Available | Positive | 2088824 - 2089144 | 12206.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


