Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium carnosum |
| Strain | strain TMW 2.2021 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394574 bp
Thymine Count
1410666 bp
Guanine Count
884433 bp
Cytosine Count
869870 bp
Genome Length
4559543 bp
Protein-coding Genes
3998 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| dna-binding transcriptional regulator tyrr | CIK00_00875 | Not Available | Negative | 196701 - 198239 | 57812.1 |
| tigr01620 family protein | CIK00_00880 | Not Available | Negative | 198550 - 199581 | 38144.6 |
| nucleoside triphosphate hydrolase | CIK00_00885 | Not Available | Negative | 199578 - 200975 | 52822.5 |
| envelope stress response membrane protein pspc | CIK00_00890 | Not Available | Negative | 201113 - 201499 | 14631.8 |
| envelope stress response membrane protein pspb | CIK00_00895 | Not Available | Negative | 201499 - 201726 | 8656.77 |
| phage shock protein pspa | CIK00_00900 | Not Available | Negative | 201802 - 202470 | 25546.2 |
| phage shock protein operon transcriptional activator | CIK00_00905 | Not Available | Positive | 202689 - 203723 | 39070.8 |
| peptide abc transporter substrate-binding protein sapa | CIK00_00910 | Not Available | Positive | 203860 - 205479 | 60378.0 |
| peptide abc transporter permease | CIK00_00915 | Not Available | Positive | 205483 - 206445 | 35947.3 |
| antimicrobial peptide abc transporter permease sapc | CIK00_00920 | Not Available | Positive | 206432 - 207319 | 32076.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


