Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium carnosum |
| Strain | strain TMW 2.2021 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394574 bp
Thymine Count
1410666 bp
Guanine Count
884433 bp
Cytosine Count
869870 bp
Genome Length
4559543 bp
Protein-coding Genes
3998 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| type iv pilus secretin pilq | CIK00_06350 | Not Available | Negative | 1347662 - 1349383 | 62478.2 |
| pilus assembly protein pilq | CIK00_06355 | Not Available | Negative | 1349397 - 1349912 | 19186.8 |
| fimbrial protein | CIK00_06360 | Not Available | Negative | 1349923 - 1350507 | 22368.0 |
| pilus assembly protein pils | CIK00_06365 | Not Available | Negative | 1350500 - 1351111 | 22957.9 |
| pilus assembly protein pilm | CIK00_06370 | Not Available | Negative | 1351108 - 1352088 | 36306.6 |
| penicillin-sensitive transpeptidase | CIK00_06375 | Not Available | Positive | 1352237 - 1354837 | 95379.4 |
| dna-binding transcriptional regulator oxyr | CIK00_06380 | Not Available | Negative | 1354921 - 1355832 | 33936.3 |
| glutathione peroxidase | CIK00_06385 | Not Available | Positive | 1355992 - 1356720 | 26607.7 |
| argininosuccinate lyase | CIK00_06390 | Not Available | Negative | 1356811 - 1358688 | 69663.7 |
| argininosuccinate synthase | CIK00_06395 | Not Available | Negative | 1358787 - 1359992 | 44042.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


