Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Vibrionales
Family
Vibrionaceae
Genus
Photobacterium
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Vibrionales |
| Family | Vibrionaceae |
| Genus | Photobacterium |
| Species | Photobacterium carnosum |
| Strain | strain TMW 2.2021 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1394574 bp
Thymine Count
1410666 bp
Guanine Count
884433 bp
Cytosine Count
869870 bp
Genome Length
4559543 bp
Protein-coding Genes
3998 genes
Non-Coding Genes
135 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glsb/yeaq/ymge family stress response membrane protein | CIK00_05740 | Not Available | Positive | 1237885 - 1238133 | 8409.66 |
| phosphoribosylglycinamide formyltransferase | CIK00_05745 | Not Available | Negative | 1238301 - 1239080 | 29254.9 |
| hypothetical protein | CIK00_05750 | Not Available | Positive | 1239421 - 1239750 | 12302.7 |
| type iii effector | CIK00_05755 | Not Available | Negative | 1239806 - 1240165 | 13866.6 |
| hypothetical protein | CIK00_05760 | Not Available | Negative | 1240233 - 1240625 | 15112.8 |
| sigma-54-dependent fis family transcriptional regulator | CIK00_05765 | Not Available | Positive | 1241036 - 1242382 | 50918.7 |
| hypothetical protein | CIK00_05770 | Not Available | Negative | 1242383 - 1243312 | 35564.1 |
| ggdef domain-containing protein | CIK00_05775 | Not Available | Negative | 1243452 - 1244558 | 42061.2 |
| anaerobic ribonucleoside-triphosphate reductase | CIK00_05780 | Not Available | Positive | 1244879 - 1247014 | 79545.3 |
| anaerobic ribonucleotide reductase-activating protein | CIK00_05785 | Not Available | Positive | 1247095 - 1247568 | 17944.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.


