Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Alphaproteobacteria
Order
Hyphomicrobiales
Family
Nitrobacteraceae
Genus
Rhodoplanes
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Alphaproteobacteria |
| Order | Hyphomicrobiales |
| Family | Nitrobacteraceae |
| Genus | Rhodoplanes |
| Species | Rhodoplanes serenus |
| Strain | strain DSM 19946 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Gram-negative |
| Shape | rod |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | anaerobic |
| Optimal temperature | 37 |
| Temperature range | mesophilic |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
798481 bp
Thymine Count
801159 bp
Guanine Count
1882493 bp
Cytosine Count
1887993 bp
Genome Length
5370996 bp
Protein-coding Genes
4991 genes
Non-Coding Genes
67 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glycosyl transferase family 1 | CH340_23970 | Not Available | Positive | 5106278 - 5107674 | 48257.2 |
| uracil-dna glycosylase | CH340_23975 | Not Available | Negative | 5107910 - 5108644 | 26135.2 |
| nyn domain-containing protein | CH340_23980 | Not Available | Negative | 5108644 - 5109291 | 24266.7 |
| dna-directed rna polymerase subunit omega | CH340_23985 | Not Available | Positive | 5109615 - 5110022 | 14998.5 |
| hypothetical protein | CH340_23990 | Not Available | Positive | 5110037 - 5111227 | 41106.5 |
| hypothetical protein | CH340_23995 | Not Available | Positive | 5111446 - 5112267 | 29823.3 |
| 30s ribosomal protein s4 | CH340_24000 | Not Available | Positive | 5112725 - 5113342 | 23417.4 |
| doxx family protein | CH340_24005 | Not Available | Negative | 5113434 - 5113829 | 14521.2 |
| transporter | CH340_24010 | Not Available | Positive | 5113932 - 5114474 | 18578.0 |
| hypothetical protein | CH340_24015 | Not Available | Negative | 5114462 - 5114700 | 8880.94 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
