Rhodoplanes serenus strain DSM 19946

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodoplanes

Description

Rhodoplanes serenus strain DSM 19946 is a Gram-negative, anaerobic bacterium characterized by its rod-shaped morphology. This strain thrives under mesophilic conditions, with an optimal growth temperature of 37°C. It possesses a single replicon, indicating a streamlined genomic organization. The anaerobic nature of Rhodoplanes serenus suggests its ecological role in environments where oxygen is limited or absent, such as in sediment or aquatic ecosystems. This adaptation may allow it to participate in various biogeochemical cycles, particularly those involving organic matter decomposition. The specific accession number for this strain is NPEW00000000.1, which provides a reference for further genomic studies or applications. Understanding the traits of Rhodoplanes serenus can contribute to our knowledge of microbial diversity and function in anaerobic environments. Its ability to thrive in specific temperature ranges and its Gram-negative classification may also have implications for its interactions with other microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodoplanes
SpeciesRhodoplanes serenus
Strainstrain DSM 19946

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes serenus strain DSM 19946

Gene Summary

Adenine Count

798481 bp

Thymine Count

801159 bp

Guanine Count

1882493 bp

Cytosine Count

1887993 bp

Genome Length

5370996 bp

Protein-coding Genes

4991 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
lysr family transcriptional regulatorCH340_17220Not AvailableNegative3726582 - 372748432469.2
nad-dependent succinate-semialdehyde dehydrogenaseCH340_17230Not AvailableNegative3728030 - 372948151541.8
alpha-ketoacid dehydrogenase subunit betaCH340_17235Not AvailableNegative3729707 - 373068734946.5
pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alphaCH340_17240Not AvailableNegative3730675 - 373171537790.9
eama family transporterCH340_17245Not AvailableNegative3731917 - 373282832751.1
abc transporter atp-binding proteinCH340_17250Not AvailableNegative3733099 - 373396530009.3
nitrate/sulfonate/bicarbonate abc transporter atp-binding proteinCH340_17255Not AvailableNegative3733962 - 373474426916.8
nitrate abc transporter substrate-binding proteinCH340_17260Not AvailableNegative3734794 - 373585838691.7
creatininaseCH340_17265Not AvailablePositive3735974 - 373678029199.9
gamma-glutamyltransferaseCH340_17270Not AvailablePositive3736815 - 373712410586.7

Displaying genes 3351 – 3360 of 5058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.