Rhodoplanes serenus strain DSM 19946

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodoplanes

Description

Rhodoplanes serenus strain DSM 19946 is a Gram-negative, anaerobic bacterium characterized by its rod-shaped morphology. This strain thrives under mesophilic conditions, with an optimal growth temperature of 37°C. It possesses a single replicon, indicating a streamlined genomic organization. The anaerobic nature of Rhodoplanes serenus suggests its ecological role in environments where oxygen is limited or absent, such as in sediment or aquatic ecosystems. This adaptation may allow it to participate in various biogeochemical cycles, particularly those involving organic matter decomposition. The specific accession number for this strain is NPEW00000000.1, which provides a reference for further genomic studies or applications. Understanding the traits of Rhodoplanes serenus can contribute to our knowledge of microbial diversity and function in anaerobic environments. Its ability to thrive in specific temperature ranges and its Gram-negative classification may also have implications for its interactions with other microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodoplanes
SpeciesRhodoplanes serenus
Strainstrain DSM 19946

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes serenus strain DSM 19946

Gene Summary

Adenine Count

798481 bp

Thymine Count

801159 bp

Guanine Count

1882493 bp

Cytosine Count

1887993 bp

Genome Length

5370996 bp

Protein-coding Genes

4991 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
ccoq/fixq family cbb3-type cytochrome c oxidase assembly chaperoneCH340_15020Not AvailablePositive3246097 - 32462585964.38
cytochrome-c oxidase, cbb3-type subunit iiiCH340_15025Not AvailablePositive3246262 - 324713131068.7
cytochrome c oxidase accessory protein ccogCH340_15030Not AvailablePositive3247282 - 324873653867.6
hypothetical proteinCH340_15035Not AvailablePositive3248760 - 324915913914.7
rhodaneseCH340_15040Not AvailableNegative3249282 - 324967413760.5
hypothetical proteinCH340_15045Not AvailablePositive3249836 - 32500457607.15
hypothetical proteinCH340_15050Not AvailableNegative3250036 - 32502216176.56
hypothetical proteinCH340_15055Not AvailablePositive3250412 - 32506097008.4
histidinol-phosphate aminotransferaseCH340_15060Not AvailableNegative3250644 - 325175938815.7
abc transporter substrate-binding proteinCH340_15065Not AvailablePositive3252347 - 325354943120.8

Displaying genes 2931 – 2940 of 5058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.