Rhodoplanes serenus strain DSM 19946

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodoplanes

Description

Rhodoplanes serenus strain DSM 19946 is a Gram-negative, anaerobic bacterium characterized by its rod-shaped morphology. This strain thrives under mesophilic conditions, with an optimal growth temperature of 37°C. It possesses a single replicon, indicating a streamlined genomic organization. The anaerobic nature of Rhodoplanes serenus suggests its ecological role in environments where oxygen is limited or absent, such as in sediment or aquatic ecosystems. This adaptation may allow it to participate in various biogeochemical cycles, particularly those involving organic matter decomposition. The specific accession number for this strain is NPEW00000000.1, which provides a reference for further genomic studies or applications. Understanding the traits of Rhodoplanes serenus can contribute to our knowledge of microbial diversity and function in anaerobic environments. Its ability to thrive in specific temperature ranges and its Gram-negative classification may also have implications for its interactions with other microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodoplanes
SpeciesRhodoplanes serenus
Strainstrain DSM 19946

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes serenus strain DSM 19946

Gene Summary

Adenine Count

798481 bp

Thymine Count

801159 bp

Guanine Count

1882493 bp

Cytosine Count

1887993 bp

Genome Length

5370996 bp

Protein-coding Genes

4991 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
gntr family transcriptional regulatorCH340_06955Not AvailableNegative1491664 - 149250630030.4
laci family transcriptional regulatorCH340_06960Not AvailablePositive1492912 - 149391934983.1
glucarate dehydrataseCH340_06965Not AvailablePositive1494028 - 149537148105.6
2-dehydro-3-deoxyglucarate aldolaseCH340_06970Not AvailablePositive1495408 - 149619628534.0
2-hydroxy-3-oxopropionate reductaseCH340_06975Not AvailablePositive1496276 - 149717231013.0
short-chain dehydrogenaseCH340_06980Not AvailableNegative1497456 - 149814523637.6
x-pro aminopeptidaseCH340_06985Not AvailableNegative1498176 - 150000865258.6
hypothetical proteinCH340_06990Not AvailablePositive1500316 - 15005257819.42
hypothetical proteinCH340_06995Not AvailablePositive1501043 - 150132110027.6
50s ribosomal protein l11 methyltransferaseCH340_07000Not AvailableNegative1501421 - 150239534077.4

Displaying genes 1391 – 1400 of 5058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.