Rhodoplanes serenus strain DSM 19946

rodanaerobic

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Alphaproteobacteria

Order

Hyphomicrobiales

Family

Nitrobacteraceae

Genus

Rhodoplanes

Description

Rhodoplanes serenus strain DSM 19946 is a Gram-negative, anaerobic bacterium characterized by its rod-shaped morphology. This strain thrives under mesophilic conditions, with an optimal growth temperature of 37°C. It possesses a single replicon, indicating a streamlined genomic organization. The anaerobic nature of Rhodoplanes serenus suggests its ecological role in environments where oxygen is limited or absent, such as in sediment or aquatic ecosystems. This adaptation may allow it to participate in various biogeochemical cycles, particularly those involving organic matter decomposition. The specific accession number for this strain is NPEW00000000.1, which provides a reference for further genomic studies or applications. Understanding the traits of Rhodoplanes serenus can contribute to our knowledge of microbial diversity and function in anaerobic environments. Its ability to thrive in specific temperature ranges and its Gram-negative classification may also have implications for its interactions with other microbial communities and its potential applications in biotechnology or environmental management.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassAlphaproteobacteria
OrderHyphomicrobiales
FamilyNitrobacteraceae
GenusRhodoplanes
SpeciesRhodoplanes serenus
Strainstrain DSM 19946

Profile

Physiology
Gram staining propertiesGram-negative
Shaperod
MobilityNot Available
Flagellar presenceNot Available
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsanaerobic
Optimal temperature37
Temperature rangemesophilic
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Rhodoplanes serenus strain DSM 19946

Gene Summary

Adenine Count

798481 bp

Thymine Count

801159 bp

Guanine Count

1882493 bp

Cytosine Count

1887993 bp

Genome Length

5370996 bp

Protein-coding Genes

4991 genes

Non-Coding Genes

67 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
adp-ribosyl-[dinitrogen reductase] hydrolaseCH340_05645Not AvailablePositive1207368 - 120826731920.6
ferredoxin family proteinCH340_05650Not AvailableNegative1208293 - 120858910762.8
fad-dependent oxidoreductaseCH340_05655Not AvailableNegative1208624 - 120992847596.3
electron transfer flavoprotein subunit alphaCH340_05660Not AvailableNegative1210048 - 121115139585.9
nitrogen fixation protein fixaCH340_05665Not AvailableNegative1211168 - 121201329841.3
nitrogenase stabilizing/protective protein nifwCH340_05670Not AvailableNegative1212042 - 121239512673.3
homocitrate synthaseCH340_05675Not AvailableNegative1212395 - 121362142135.5
hypothetical proteinCH340_05680Not AvailableNegative1213633 - 12139119478.75
iron-sulfur cluster assembly accessory proteinCH340_05685Not AvailableNegative1213922 - 121423910827.1
nitrogen fixation protein nifqCH340_05690Not AvailableNegative1214507 - 121521424934.6

Displaying genes 1131 – 1140 of 5058 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.