Leptospira sp. mixed culture ATI2-C-A1

Kingdom

Pseudomonadati

Phylum

Spirochaetota

Class

Leptospiria

Order

Leptospirales

Family

Leptospiraceae

Genus

Leptospira

Description

Leptospira sp. mixed culture ATI2-C-A1 is characterized by the presence of flagella, which are crucial for its motility and ability to navigate through aquatic environments. This trait is significant as it supports the organism's adaptation to its ecological niche, often associated with water sources. The culture is defined by a single replicon, indicating a streamlined genetic makeup that can be advantageous for stability and replication within its habitat. The accession number for this strain is NPEK00000000.1, which provides a reference for genomic data that can aid in further study and classification. The genomic insights may reveal specific adaptations or metabolic pathways that enhance its survival in diverse ecosystems, particularly those influenced by water. Understanding the traits of Leptospira sp. mixed culture ATI2-C-A1 contributes to our knowledge of its ecological role. Its flagella enable it to interact with various environments, likely influencing its distribution and interactions with other microbial communities. The presence of this organism in mixed cultures can have implications for the overall microbial dynamics in its habitat, potentially affecting nutrient cycling and the health of aquatic systems.

Taxonomy

KingdomPseudomonadati
PhylumSpirochaetota
ClassLeptospiria
OrderLeptospirales
FamilyLeptospiraceae
GenusLeptospira
SpeciesLeptospira sp. mixed culture ATI2-C-A1
StrainNo strain

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Leptospira sp. mixed culture ATI2-C-A1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Leptospira sp. mixed culture ATI2-C-A1 contig_334, whole genome

Gene Summary

Adenine Count

2143586 bp

Thymine Count

2153775 bp

Guanine Count

1323919 bp

Cytosine Count

1302010 bp

Genome Length

6923300 bp

Protein-coding Genes

6615 genes

Non-Coding Genes

65 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
alcohol dehydrogenaseCH381_31950Not AvailableNegative6623395 - 662392819318.8
molecular chaperone hsp33CH381_31955Not AvailablePositive6624012 - 662486632629.7
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex atpase subunit type 1 tsaeCH381_31960Not AvailablePositive6624863 - 662532117890.2
trna (adenosine(37)-n6)-threonylcarbamoyltransferase complex dimerization subunit type 1 tsabCH381_31965Not AvailablePositive6625318 - 662598925384.0
ribonuclease rCH381_31970Not AvailablePositive6625994 - 662818684914.3
type i phosphodiesterase/nucleotide pyrophosphataseCH381_31975Not AvailableNegative6628207 - 662907132858.1
oxygen-independent coproporphyrinogen iii oxidaseCH381_31980Not AvailableNegative6629072 - 663036950070.1
uroporphyrinogen decarboxylaseCH381_31985Not AvailableNegative6630366 - 663140939363.6
aspartate aminotransferase family proteinCH381_31990Not AvailableNegative6631406 - 663268946646.2
delta-aminolevulinic acid dehydrataseCH381_31995Not AvailableNegative6632686 - 663363935273.3

Displaying genes 6331 – 6340 of 6680 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.