Acidovorax kalamii strain KNDSW-TSA6

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Acidovorax

Description

Acidovorax kalamii strain KNDSW-TSA6 is a Gram-negative bacterium characterized by its bacilli shape and the presence of flagella. This motility feature may contribute to its ability to thrive in various environments. The strain contains a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The accession number for Acidovorax kalamii strain KNDSW-TSA6 is NOIG00000000.1, which provides a reference for researchers seeking genomic and taxonomic information about this organism. As a member of the Acidovorax genus, this strain is likely involved in diverse ecological roles, particularly in environments where organic matter is present, as members of this genus are known for their metabolic versatility. The biological and ecological insight regarding Acidovorax kalamii strain KNDSW-TSA6 lies in its potential role in biogeochemical cycles. Gram-negative bacilli are often associated with the degradation of complex organic compounds, and the presence of flagella may enhance its mobility toward nutrient sources. This adaptability suggests that Acidovorax kalamii strain KNDSW-TSA6 could play a significant role in the breakdown of organic materials in its natural habitat, contributing to nutrient cycling and the maintenance of ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAcidovorax
SpeciesAcidovorax kalamii
Strainstrain KNDSW-TSA6

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Acidovorax kalamii strain KNDSW-TSA6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax kalamii strain KNDSW-TSA6 contig_31, whole genome

Gene Summary

Adenine Count

874297 bp

Thymine Count

888673 bp

Guanine Count

1702708 bp

Cytosine Count

1672226 bp

Genome Length

5137998 bp

Protein-coding Genes

4553 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
peptide abc transporterCBY09_22565Not AvailablePositive4952523 - 495413358249.0
peptide abc transporterCBY09_22570Not AvailablePositive4954152 - 495510233613.4
peptide abc transporter permeaseCBY09_22575Not AvailablePositive4955099 - 495596231117.2
dipeptide abc transporter atp-binding protein dppdCBY09_22580Not AvailablePositive4955959 - 495702337967.1
peptide abc transporter atp-binding proteinCBY09_22585Not AvailablePositive4957050 - 495804236015.4
amino acid deaminaseCBY09_22590Not AvailablePositive4958039 - 495932546895.1
rpir family transcriptional regulatorCBY09_22595Not AvailablePositive4959328 - 496029034186.8
d-aminoacylaseCBY09_22600Not AvailablePositive4960292 - 496177953145.7
hypothetical proteinCBY09_22605Not AvailableNegative4961873 - 496237618671.9
leucine--trna ligaseCBY09_22610Not AvailableNegative4962381 - 4965104100712.0

Displaying genes 4481 – 4490 of 4646 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.