Acidovorax kalamii strain KNDSW-TSA6

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Acidovorax

Description

Acidovorax kalamii strain KNDSW-TSA6 is a Gram-negative bacterium characterized by its bacilli shape and the presence of flagella. This motility feature may contribute to its ability to thrive in various environments. The strain contains a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The accession number for Acidovorax kalamii strain KNDSW-TSA6 is NOIG00000000.1, which provides a reference for researchers seeking genomic and taxonomic information about this organism. As a member of the Acidovorax genus, this strain is likely involved in diverse ecological roles, particularly in environments where organic matter is present, as members of this genus are known for their metabolic versatility. The biological and ecological insight regarding Acidovorax kalamii strain KNDSW-TSA6 lies in its potential role in biogeochemical cycles. Gram-negative bacilli are often associated with the degradation of complex organic compounds, and the presence of flagella may enhance its mobility toward nutrient sources. This adaptability suggests that Acidovorax kalamii strain KNDSW-TSA6 could play a significant role in the breakdown of organic materials in its natural habitat, contributing to nutrient cycling and the maintenance of ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAcidovorax
SpeciesAcidovorax kalamii
Strainstrain KNDSW-TSA6

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Acidovorax kalamii strain KNDSW-TSA6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax kalamii strain KNDSW-TSA6 contig_31, whole genome

Gene Summary

Adenine Count

874297 bp

Thymine Count

888673 bp

Guanine Count

1702708 bp

Cytosine Count

1672226 bp

Genome Length

5137998 bp

Protein-coding Genes

4553 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
23s rrna pseudouridylate synthase bCBY09_22415Not AvailablePositive4919307 - 492089955586.8
nucleoside-diphosphate kinaseCBY09_22420Not AvailablePositive4920989 - 492141415385.6
23s rrna (adenine(2503)-c(2))-methyltransferase rlmnCBY09_22425Not AvailablePositive4921502 - 492261440889.2
type iv pilus biogenesis/stability protein pilwCBY09_22430Not AvailablePositive4922651 - 492348430774.6
helix-turn-helix domain-containing proteinCBY09_22435Not AvailablePositive4923477 - 492440630478.4
4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthaseCBY09_22440Not AvailablePositive4924420 - 492567645261.4
histidine--trna ligaseCBY09_22445Not AvailablePositive4925799 - 492709447380.8
hypothetical proteinCBY09_22450Not AvailablePositive4927121 - 492780724694.8
outer membrane protein assembly factor bambCBY09_22455Not AvailablePositive4927812 - 492897839787.4
ribosome biogenesis gtpase derCBY09_22460Not AvailablePositive4928992 - 493033549188.3

Displaying genes 4451 – 4460 of 4646 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.