Acidovorax kalamii strain KNDSW-TSA6

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Acidovorax

Description

Acidovorax kalamii strain KNDSW-TSA6 is a Gram-negative bacterium characterized by its bacilli shape and the presence of flagella. This motility feature may contribute to its ability to thrive in various environments. The strain contains a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The accession number for Acidovorax kalamii strain KNDSW-TSA6 is NOIG00000000.1, which provides a reference for researchers seeking genomic and taxonomic information about this organism. As a member of the Acidovorax genus, this strain is likely involved in diverse ecological roles, particularly in environments where organic matter is present, as members of this genus are known for their metabolic versatility. The biological and ecological insight regarding Acidovorax kalamii strain KNDSW-TSA6 lies in its potential role in biogeochemical cycles. Gram-negative bacilli are often associated with the degradation of complex organic compounds, and the presence of flagella may enhance its mobility toward nutrient sources. This adaptability suggests that Acidovorax kalamii strain KNDSW-TSA6 could play a significant role in the breakdown of organic materials in its natural habitat, contributing to nutrient cycling and the maintenance of ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAcidovorax
SpeciesAcidovorax kalamii
Strainstrain KNDSW-TSA6

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Acidovorax kalamii strain KNDSW-TSA6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax kalamii strain KNDSW-TSA6 contig_31, whole genome

Gene Summary

Adenine Count

874297 bp

Thymine Count

888673 bp

Guanine Count

1702708 bp

Cytosine Count

1672226 bp

Genome Length

5137998 bp

Protein-coding Genes

4553 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
50s ribosomal protein l3 n(5)-glutamine methyltransferaseCBY09_19335Not AvailableNegative4206843 - 420778433501.9
succinyl-diaminopimelate desuccinylaseCBY09_19340Not AvailableNegative4207781 - 420897442552.7
type iv pili twitching motility protein piltCBY09_19345Not AvailableNegative4209138 - 421030142459.4
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate n-succinyltransferaseCBY09_19350Not AvailableNegative4210370 - 421120329466.4
succinyldiaminopimelate transaminaseCBY09_19355Not AvailableNegative4211249 - 421245444079.6
chemotaxis proteinCBY09_19360Not AvailablePositive4212627 - 421411151642.3
ferredoxinCBY09_19365Not AvailableNegative4214169 - 421481022346.4
polyhydroxyalkanoate depolymeraseCBY09_19370Not AvailableNegative4214849 - 421644758569.4
(p)ppgpp synthetaseCBY09_19375Not AvailableNegative4216587 - 421767240680.1
bifunctional diguanylate cyclase/phosphodiesteraseCBY09_19380Not AvailablePositive4217852 - 4220677103152.0

Displaying genes 3841 – 3850 of 4646 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.