Acidovorax kalamii strain KNDSW-TSA6

Gram-negativeBacilli

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Betaproteobacteria

Order

Burkholderiales

Family

Comamonadaceae

Genus

Acidovorax

Description

Acidovorax kalamii strain KNDSW-TSA6 is a Gram-negative bacterium characterized by its bacilli shape and the presence of flagella. This motility feature may contribute to its ability to thrive in various environments. The strain contains a single replicon, indicating a streamlined genomic structure that may facilitate efficient replication and adaptation. The accession number for Acidovorax kalamii strain KNDSW-TSA6 is NOIG00000000.1, which provides a reference for researchers seeking genomic and taxonomic information about this organism. As a member of the Acidovorax genus, this strain is likely involved in diverse ecological roles, particularly in environments where organic matter is present, as members of this genus are known for their metabolic versatility. The biological and ecological insight regarding Acidovorax kalamii strain KNDSW-TSA6 lies in its potential role in biogeochemical cycles. Gram-negative bacilli are often associated with the degradation of complex organic compounds, and the presence of flagella may enhance its mobility toward nutrient sources. This adaptability suggests that Acidovorax kalamii strain KNDSW-TSA6 could play a significant role in the breakdown of organic materials in its natural habitat, contributing to nutrient cycling and the maintenance of ecosystem health.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassBetaproteobacteria
OrderBurkholderiales
FamilyComamonadaceae
GenusAcidovorax
SpeciesAcidovorax kalamii
Strainstrain KNDSW-TSA6

Profile

Physiology
Gram staining propertiesNegative
ShapeBacilli
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Image of Acidovorax kalamii strain KNDSW-TSA6
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Acidovorax kalamii strain KNDSW-TSA6 contig_31, whole genome

Gene Summary

Adenine Count

874297 bp

Thymine Count

888673 bp

Guanine Count

1702708 bp

Cytosine Count

1672226 bp

Genome Length

5137998 bp

Protein-coding Genes

4553 genes

Non-Coding Genes

93 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
(2fe-2s)-binding proteinCBY09_06805Not AvailableNegative1471744 - 147220816357.0
protein disulfide oxidoreductaseCBY09_06810Not AvailableNegative1472375 - 147297721913.4
phosphoserine phosphatase serbCBY09_06815Not AvailableNegative1473000 - 147371325216.6
hypothetical proteinCBY09_06820Not AvailableNegative1473844 - 14740386807.56
hypothetical proteinCBY09_06825Not AvailableNegative1474175 - 147496027198.5
hypothetical proteinCBY09_06830Not AvailableNegative1474944 - 147560623684.8
transcription-repair coupling factorCBY09_06835Not AvailableNegative1475688 - 1479164129083.0
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseCBY09_06840Not AvailablePositive1479350 - 148025531109.4
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseCBY09_06845Not AvailablePositive1480286 - 148076516587.1
flavin-nucleotide-binding proteinCBY09_06850Not AvailableNegative1480770 - 148142623601.1

Displaying genes 1441 – 1450 of 4646 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.