Pseudomonas fluorescens strain SC1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain SC1 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is a heterotrophic aerobe, thriving in various habitats while requiring oxygen for its metabolic processes. It is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its adaptability to moderate temperature ranges. This bacterium exists as free-living organisms and has a single replicon and a unique double-membrane structure. Pseudomonas fluorescens strain SC1 is known to have biotic relationships with a diverse array of hosts, including Homo sapiens, various metazoans, and numerous plant species such as Triticum aestivum (wheat), Solanum tuberosum (potato), and Brassica oleracea var. italica (broccoli). The interaction with these hosts suggests potential ecological roles in both pathogenicity and symbiosis. While Pseudomonas fluorescens strain SC1 is primarily free-living, it is noted for its association with bacterial infections in animals, highlighting its pathogenicity. This characteristic underscores the importance of understanding its ecological roles and potential impacts on health, particularly in relation to its various hosts. The strain's versatility in habitat and host associations may contribute to its survival and proliferation in diverse environments, reflecting the complex interactions within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain SC1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain SC1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain SC1

Gene Summary

Adenine Count

1223240 bp

Thymine Count

1227714 bp

Guanine Count

1849367 bp

Cytosine Count

1850910 bp

Genome Length

6151231 bp

Protein-coding Genes

5606 genes

Non-Coding Genes

190 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
dihydrolipoyl dehydrogenaseCGU37_26135Not AvailableNegative5652468 - 565384748406.7
branched-chain alpha-keto acid dehydrogenase subunit e2CGU37_26140Not AvailableNegative5653852 - 565510244617.1
alpha-ketoacid dehydrogenase subunit betaCGU37_26145Not AvailableNegative5655103 - 565616138481.9
3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring) subunit alphaCGU37_26150Not AvailableNegative5656163 - 565739845063.9
lrp/asnc family transcriptional regulatorCGU37_26155Not AvailablePositive5657594 - 565808218097.2
mbl fold metallo-hydrolaseCGU37_26160Not AvailableNegative5658693 - 565955631368.5
arsr family transcriptional regulatorCGU37_26165Not AvailablePositive5659652 - 565998712099.8
pyridine nucleotide-disulfide oxidoreductaseCGU37_26170Not AvailablePositive5660039 - 566128345723.2
hypothetical proteinCGU37_26175Not AvailablePositive5661284 - 566209027229.7
gfdt proteinCGU37_26180Not AvailablePositive5662656 - 566381341950.9

Displaying genes 5171 – 5180 of 5796 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total