Pseudomonas fluorescens strain SC1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain SC1 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is a heterotrophic aerobe, thriving in various habitats while requiring oxygen for its metabolic processes. It is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its adaptability to moderate temperature ranges. This bacterium exists as free-living organisms and has a single replicon and a unique double-membrane structure. Pseudomonas fluorescens strain SC1 is known to have biotic relationships with a diverse array of hosts, including Homo sapiens, various metazoans, and numerous plant species such as Triticum aestivum (wheat), Solanum tuberosum (potato), and Brassica oleracea var. italica (broccoli). The interaction with these hosts suggests potential ecological roles in both pathogenicity and symbiosis. While Pseudomonas fluorescens strain SC1 is primarily free-living, it is noted for its association with bacterial infections in animals, highlighting its pathogenicity. This characteristic underscores the importance of understanding its ecological roles and potential impacts on health, particularly in relation to its various hosts. The strain's versatility in habitat and host associations may contribute to its survival and proliferation in diverse environments, reflecting the complex interactions within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain SC1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain SC1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain SC1

Gene Summary

Adenine Count

1223240 bp

Thymine Count

1227714 bp

Guanine Count

1849367 bp

Cytosine Count

1850910 bp

Genome Length

6151231 bp

Protein-coding Genes

5606 genes

Non-Coding Genes

190 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
invasion protein iagbCGU37_07555Not AvailableNegative1643087 - 164354517163.6
transcriptional regulatorCGU37_07560Not AvailableNegative1643538 - 164392714262.3
hypothetical proteinCGU37_07565Not AvailableNegative1644080 - 16443078352.37
escc/yscc/hrcc family type iii secretion system outer membrane ring proteinCGU37_07570Not AvailableNegative1644320 - 164576253643.4
nitrate transporterCGU37_07575Not AvailablePositive1646035 - 164726144605.8
response regulatorCGU37_07580Not AvailablePositive1647275 - 164785021696.7
nark/nasa family nitrate transporterCGU37_07585Not AvailablePositive1648058 - 164926942728.9
protein kinaseCGU37_07590Not AvailablePositive1649269 - 165093961963.3
uroporphyrinogen-iii c-methyltransferaseCGU37_07595Not AvailablePositive1650964 - 165170726281.1
porinCGU37_07600Not AvailableNegative1651767 - 165274734598.1

Displaying genes 1621 – 1630 of 5796 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total