Pseudomonas fluorescens strain SC1

Gram-negativeRodMotileAerobe

Kingdom

Pseudomonadati

Phylum

Pseudomonadota

Class

Gammaproteobacteria

Order

Pseudomonadales

Family

Pseudomonadaceae

Genus

Pseudomonas

Description

Pseudomonas fluorescens strain SC1 is a Gram-negative, rod-shaped bacterium that exhibits mobility due to the presence of flagella. This strain is a heterotrophic aerobe, thriving in various habitats while requiring oxygen for its metabolic processes. It is classified as mesophilic, with an optimal growth temperature of 25°C, indicating its adaptability to moderate temperature ranges. This bacterium exists as free-living organisms and has a single replicon and a unique double-membrane structure. Pseudomonas fluorescens strain SC1 is known to have biotic relationships with a diverse array of hosts, including Homo sapiens, various metazoans, and numerous plant species such as Triticum aestivum (wheat), Solanum tuberosum (potato), and Brassica oleracea var. italica (broccoli). The interaction with these hosts suggests potential ecological roles in both pathogenicity and symbiosis. While Pseudomonas fluorescens strain SC1 is primarily free-living, it is noted for its association with bacterial infections in animals, highlighting its pathogenicity. This characteristic underscores the importance of understanding its ecological roles and potential impacts on health, particularly in relation to its various hosts. The strain's versatility in habitat and host associations may contribute to its survival and proliferation in diverse environments, reflecting the complex interactions within microbial ecosystems.

Taxonomy

KingdomPseudomonadati
PhylumPseudomonadota
ClassGammaproteobacteria
OrderPseudomonadales
FamilyPseudomonadaceae
GenusPseudomonas
SpeciesPseudomonas fluorescens
Strainstrain SC1

Profile

Physiology
Gram staining propertiesNegative
ShapeRod
MobilityYes
Flagellar presenceYes
Number of membranes2
Image of Pseudomonas fluorescens strain SC1
Image source: Wikipedia/Wikimedia
Ecology, Host, and Life Cycle
Oxygen requirementsAerobe
Optimal temperature25
Temperature rangeMesophilic
HabitatMultiple
Biotic relationshipFree living
Host(s)Homo sapiens, Metazoa, Viridiplantae
Cell arrangementSingles
SporulationNot Available
Energy sourceHeterotroph
PathogenicityAnimal

Genome Summary

Pseudomonas fluorescens strain SC1

Gene Summary

Adenine Count

1223240 bp

Thymine Count

1227714 bp

Guanine Count

1849367 bp

Cytosine Count

1850910 bp

Genome Length

6151231 bp

Protein-coding Genes

5606 genes

Non-Coding Genes

190 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
phosphopyruvate hydrataseCGU37_04935Not AvailablePositive1070477 - 107176645592.2
cell division protein ftsbCGU37_04940Not AvailablePositive1071938 - 107221610651.9
2-c-methyl-d-erythritol 4-phosphate cytidylyltransferaseCGU37_04945Not AvailablePositive1072213 - 107292025782.9
lysr family transcriptional regulatorCGU37_04950Not AvailableNegative1073043 - 107393933842.7
s-(hydroxymethyl)glutathione dehydrogenase/class iii alcohol dehydrogenaseCGU37_04955Not AvailablePositive1074049 - 107516139144.5
s-formylglutathione hydrolaseCGU37_04960Not AvailablePositive1075253 - 107609831185.1
2-c-methyl-d-erythritol 2,4-cyclodiphosphate synthaseCGU37_04965Not AvailablePositive1076153 - 107662616753.2
trna pseudouridine(13) synthase trudCGU37_04970Not AvailablePositive1076623 - 107768138434.8
5'/3'-nucleotidase sureCGU37_04975Not AvailablePositive1077669 - 107841826360.3
protein-l-isoaspartate o-methyltransferaseCGU37_04980Not AvailablePositive1078418 - 107909525080.5

Displaying genes 1101 – 1110 of 5796 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

Health ConditionRelationReference
Bacterial infectionsCausesPMC7578172

Displaying health effects 1 – 1 of 1 in total