Amycolatopsis vastitatis strain H5

Kingdom

Bacillati

Phylum

Actinomycetota

Class

Actinomycetes

Order

Pseudonocardiales

Family

Pseudonocardiaceae

Genus

Amycolatopsis

Description

Amycolatopsis vastitatis strain H5 is characterized by the presence of flagella, which suggests that this strain possesses motility capabilities. It has a single replicon, indicating a streamlined genomic structure. The strain is cataloged with the accession number NMUL00000000.1, which is essential for referencing its genomic data in research. The presence of flagella in Amycolatopsis vastitatis strain H5 may enhance its ability to navigate its environment, which can be crucial for survival and adaptation to various ecological niches. Flagella are typically associated with movement toward favorable conditions and away from harmful stimuli, enabling the organism to exploit resources effectively. Understanding the traits of Amycolatopsis vastitatis strain H5 can provide insights into its ecological role and interactions within its environment. The presence of a single replicon could suggest a more efficient replication process, potentially allowing for rapid adaptation to environmental changes. These features may contribute to the strain's ecological fitness and its potential applications in biotechnological processes, such as antibiotic production or bioremediation.

Taxonomy

KingdomBacillati
PhylumActinomycetota
ClassActinomycetes
OrderPseudonocardiales
FamilyPseudonocardiaceae
GenusAmycolatopsis
SpeciesAmycolatopsis vastitatis
Strainstrain H5

Profile

Physiology
Gram staining propertiesNot Available
ShapeNot Available
MobilityNot Available
Flagellar presenceYes
Number of membranesNot Available
Ecology, Host, and Life Cycle
Oxygen requirementsNot Available
Optimal temperatureNot Available
Temperature rangeNot Available
HabitatNot Available
Biotic relationshipNot Available
Host(s)Not Available
Cell arrangementNot Available
SporulationNot Available
Energy sourceNot Available
PathogenicityNot Available

Genome Summary

Amycolatopsis vastitatis strain H5 contig00167, whole genome

Gene Summary

Adenine Count

1559501 bp

Thymine Count

1552639 bp

Guanine Count

3773259 bp

Cytosine Count

3784627 bp

Genome Length

10670026 bp

Protein-coding Genes

9498 genes

Non-Coding Genes

106 genes

# of Chromosomes/Plasmids

1

Genes

NameLocus TagUniProt IDStrand OrientationGene Start/EndProtein Molecular Weight
asnc family transcriptional regulatorCF165_04445Not AvailableNegative884988 - 88546417395.9
hypothetical proteinCF165_04450Not AvailableNegative885669 - 88703948580.4
tetr family transcriptional regulatorCF165_04455Not AvailablePositive887103 - 88772622000.6
diaminopimelate decarboxylaseCF165_04460Not AvailableNegative887704 - 88904747481.8
delta fatty acid desaturaseCF165_04470Not AvailableNegative889317 - 89035738773.0
dihydrodipicolinate synthase family proteinCF165_04475Not AvailableNegative890816 - 89171831649.7
gntr family transcriptional regulatorCF165_04480Not AvailableNegative891715 - 89241924907.5
abc transporter substrate-binding proteinCF165_04485Not AvailablePositive892515 - 89370842854.2
spermidine/putrescine abc transporter atp-binding proteinCF165_04490Not AvailablePositive893705 - 89474837291.0
abc transporter permeaseCF165_04495Not AvailablePositive894858 - 89575131962.0

Displaying genes 931 – 940 of 9604 in total

Pathways

0 pathways

No pathways found

No metabolic pathways have been associated with this bacterium yet.

Metabolites

0 records
Metabolite IDMetabolite nameStructureCAS number
No metabolites foundTry different search terms or mass values.

Displaying 0 metabolites

Health Effects

No health effects information available for this bacterium.