Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| gntr family transcriptional regulator | CF165_03985 | Not Available | Negative | 795511 - 796215 | 25522.4 |
| 6-phosphogluconolactonase | CF165_03990 | Not Available | Negative | 796256 - 797263 | 33929.6 |
| 2-dehydro-3-deoxyphosphogluconate aldolase | CF165_03995 | Not Available | Negative | 797256 - 797873 | 20598.6 |
| short-chain dehydrogenase | CF165_04000 | Not Available | Positive | 797979 - 798662 | 23540.9 |
| galactonate dehydratase | CF165_04005 | Not Available | Positive | 798676 - 799821 | 41282.1 |
| hypothetical protein | CF165_04010 | Not Available | Positive | 799861 - 801222 | 49177.9 |
| adenylosuccinate lyase | CF165_04015 | Not Available | Positive | 801290 - 802717 | 52250.9 |
| amino acid abc transporter substrate-binding protein | CF165_04020 | Not Available | Positive | 802837 - 803652 | 28255.3 |
| amino acid abc transporter substrate-binding protein | CF165_04025 | Not Available | Positive | 803700 - 804482 | 27029.8 |
| amino acid abc transporter permease | CF165_04030 | Not Available | Positive | 804542 - 805303 | 27487.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
