Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Ncrna_class:rnase_p_rna | Not Available | Not Available | Positive | 11864 - 12255 | Not Available |
| c-type cytochrome biogenesis protein ccsb | CF165_00065 | Not Available | Negative | 11256 - 12224 | 35072.4 |
| cytochrome c biogenesis protein resb | CF165_00070 | Not Available | Negative | 12228 - 13832 | 59125.6 |
| cytochrome c biogenesis protein resc | CF165_00075 | Not Available | Negative | 13829 - 14602 | 26937.9 |
| alkyl hydroperoxide reductase | CF165_00080 | Not Available | Negative | 14870 - 15436 | 20286.6 |
| hypothetical protein | CF165_00085 | Not Available | Negative | 15433 - 16059 | 23033.6 |
| glutamate-1-semialdehyde-2,1-aminomutase | CF165_00090 | Not Available | Negative | 16056 - 17357 | 44465.6 |
| tryptophan-rich sensory protein | CF165_00095 | Not Available | Positive | 17420 - 17896 | 17069.2 |
| hypothetical protein | CF165_00100 | Not Available | Negative | 17893 - 18405 | 16838.4 |
| macrolide abc transporter permease | CF165_00105 | Not Available | Negative | 18417 - 19619 | 40693.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
