Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| vanomycin resistance protein vanb | CF165_03365 | Not Available | Positive | 672346 - 674514 | 74419.8 |
| gtp-binding protein | CF165_03370 | Not Available | Negative | 674519 - 675226 | 26105.6 |
| transcriptional regulator | CF165_03375 | Not Available | Negative | 675223 - 676062 | 31896.3 |
| mfs transporter | CF165_03380 | Not Available | Positive | 676172 - 677587 | 48086.0 |
| glsb/yeaq/ymge family stress response membrane protein | CF165_03385 | Not Available | Negative | 677650 - 677925 | 9250.8 |
| acyl-coa dehydrogenase | CF165_03390 | Not Available | Negative | 678065 - 679900 | 66926.0 |
| helix-turn-helix transcriptional regulator | CF165_03395 | Not Available | Negative | 680058 - 680843 | 27784.6 |
| double-stranded uracil-dna glycosylase | CF165_03400 | Not Available | Negative | 681110 - 681670 | 20390.4 |
| vanz family protein | CF165_03405 | Not Available | Negative | 681893 - 682537 | 23688.3 |
| oxidoreductase | CF165_03410 | Not Available | Positive | 682757 - 683836 | 37520.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
