Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CF165_03260 | Not Available | Negative | 649665 - 650132 | 16690.9 |
| tetr family transcriptional regulator | CF165_03265 | Not Available | Negative | 650175 - 650726 | 19481.5 |
| multidrug abc transporter permease | CF165_03275 | Not Available | Negative | 651702 - 653648 | 71214.9 |
| tetr family transcriptional regulator | CF165_03280 | Not Available | Negative | 653669 - 654256 | 21557.9 |
| branched-chain alpha-keto acid dehydrogenase subunit e2 | CF165_03285 | Not Available | Negative | 654403 - 655698 | 45393.7 |
| alpha-ketoacid dehydrogenase subunit beta | CF165_03290 | Not Available | Negative | 655715 - 656707 | 35729.9 |
| pyruvate dehydrogenase (acetyl-transferring) e1 component subunit alpha | CF165_03295 | Not Available | Negative | 656707 - 657912 | 44493.7 |
| peptidase m20 | CF165_03300 | Not Available | Positive | 658244 - 659701 | 51529.0 |
| hypothetical protein | CF165_03305 | Not Available | Positive | 659810 - 660166 | 13406.1 |
| hypothetical protein | CF165_03310 | Not Available | Positive | 660166 - 660489 | 11924.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
