Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| n-acetylmuramoyl-l-alanine amidase | CF165_02645 | Not Available | Negative | 509053 - 510201 | 41691.6 |
| thioredoxin | CF165_02650 | Not Available | Negative | 510483 - 510806 | 11614.2 |
| thioredoxin-disulfide reductase | CF165_02655 | Not Available | Negative | 510839 - 511831 | 35342.7 |
| hypothetical protein | CF165_02660 | Not Available | Negative | 511972 - 512772 | 26593.7 |
| rna polymerase sigma factor sigm | CF165_02665 | Not Available | Negative | 512769 - 513392 | 22583.8 |
| hypothetical protein | CF165_02670 | Not Available | Negative | 513424 - 515013 | 55287.5 |
| murein biosynthesis integral membrane protein murj | CF165_02675 | Not Available | Negative | 515093 - 517009 | 67768.6 |
| glycoprotein | CF165_02680 | Not Available | Negative | 517713 - 519863 | 72503.6 |
| nudix hydrolase | CF165_02685 | Not Available | Negative | 519860 - 520306 | 16850.0 |
| cca trna nucleotidyltransferase | CF165_02690 | Not Available | Positive | 520516 - 521952 | 53093.6 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
