Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| membrane protein insertion efficiency factor yidd | CF165_02595 | Not Available | Positive | 500055 - 500390 | 12522.9 |
| membrane protein insertase yidc | CF165_02600 | Not Available | Positive | 500396 - 501514 | 40755.7 |
| single-stranded dna-binding protein | CF165_02605 | Not Available | Positive | 501541 - 502101 | 20336.7 |
| hypothetical protein | CF165_02610 | Not Available | Positive | 502174 - 502716 | 19793.4 |
| 16s rrna (guanine(527)-n(7))-methyltransferase rsmg | CF165_02615 | Not Available | Positive | 502862 - 503554 | 24572.9 |
| chromosome partitioning protein | CF165_02620 | Not Available | Positive | 503632 - 504555 | 32895.2 |
| chromosome partitioning protein parb | CF165_02625 | Not Available | Positive | 504552 - 505553 | 36200.2 |
| d-alanine--d-alanine ligase | CF165_02630 | Not Available | Negative | 505685 - 506629 | 33058.5 |
| gntr family transcriptional regulator | CF165_02635 | Not Available | Negative | 506666 - 507985 | 47906.4 |
| gnat family n-acetyltransferase | CF165_02640 | Not Available | Positive | 508200 - 508844 | 23429.2 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
