Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Small terminase | CF165_32780 | Not Available | Positive | 6945974 - 6946432 | 16400.4 |
| Terminase large subunit | CF165_32785 | Not Available | Positive | 6946392 - 6948161 | 66081.5 |
| Portal protein | CF165_32790 | Not Available | Positive | 6948826 - 6950316 | 55101.4 |
| Capsid maturation protease | CF165_32795 | Not Available | Positive | 6950313 - 6951290 | 34929.7 |
| hypothetical protein | CF165_32800 | Not Available | Negative | 6951330 - 6951509 | 6128.73 |
| Scaffolding protein | CF165_32805 | Not Available | Positive | 6951549 - 6952214 | 23168.6 |
| Major capsid | CF165_32810 | Not Available | Positive | 6952258 - 6953253 | 35545.1 |
| hypothetical protein | CF165_32815 | Not Available | Positive | 6953253 - 6953432 | 6281.53 |
| Hypothetical protein | CF165_32820 | Not Available | Positive | 6954365 - 6954634 | 9220.89 |
| Head-to-tail connector complex protein | CF165_32825 | Not Available | Positive | 6954652 - 6954981 | 12337.4 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
