Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| glutathione/cysteine abc transporter permease/atp-binding protein | CF165_01790 | Not Available | Negative | 338364 - 341522 | 108744.0 |
| cytochrome d ubiquinol oxidase subunit ii | CF165_01795 | Not Available | Negative | 341567 - 342574 | 36028.4 |
| cytochrome ubiquinol oxidase subunit i | CF165_01800 | Not Available | Negative | 342689 - 344164 | 53886.8 |
| hypothetical protein | CF165_01805 | Not Available | Negative | 344244 - 345203 | 34885.8 |
| hypothetical protein | CF165_01810 | Not Available | Positive | 345390 - 345977 | 20129.9 |
| hypothetical protein | CF165_01815 | Not Available | Positive | 346034 - 346681 | 22424.0 |
| iclr family transcriptional regulator | CF165_01820 | Not Available | Negative | 346678 - 347319 | 21563.2 |
| hypothetical protein | CF165_01825 | Not Available | Negative | 347316 - 348077 | 26960.3 |
| homogentisate 1,2-dioxygenase | CF165_01830 | Not Available | Positive | 348256 - 349440 | 43354.8 |
| vwa domain-containing protein | CF165_01835 | Not Available | Positive | 349524 - 351332 | 63653.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
