Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sige family rna polymerase sigma factor | CF165_01585 | Not Available | Negative | 293093 - 293602 | 19006.4 |
| hypothetical protein | CF165_01590 | Not Available | Positive | 293745 - 294347 | 20230.9 |
| hypothetical protein | CF165_01595 | Not Available | Negative | 294529 - 295095 | 21351.5 |
| hypothetical protein | CF165_01600 | Not Available | Negative | 295210 - 295584 | 13407.6 |
| acetyltransferase | CF165_01605 | Not Available | Negative | 295594 - 296217 | 22899.2 |
| glucosyltransferase | CF165_01610 | Not Available | Negative | 296204 - 297400 | 43769.7 |
| udp-glucose 4-epimerase | CF165_01615 | Not Available | Negative | 297471 - 298400 | 34073.7 |
| pyridoxal phosphate-dependent aminotransferase | CF165_01620 | Not Available | Negative | 298424 - 299521 | 39133.3 |
| afsr family transcriptional regulator | CF165_01625 | Not Available | Positive | 299685 - 302840 | 111360.0 |
| hydroxyglutarate oxidase | CF165_01630 | Not Available | Positive | 302852 - 304042 | 42590.1 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
