Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| Trna-ser | Not Available | Not Available | Positive | 213270 - 213359 | Not Available |
| hypothetical protein | CF165_01190 | Not Available | Negative | 213425 - 215140 | 62207.5 |
| acetoacetate--coa ligase | CF165_01195 | Not Available | Negative | 215163 - 217157 | 71896.5 |
| carboxymethylenebutenolidase | CF165_01200 | Not Available | Negative | 217298 - 217927 | 22112.9 |
| histidinol-phosphate transaminase | CF165_01205 | Not Available | Positive | 218074 - 219129 | 38067.6 |
| transcriptional regulator | CF165_01210 | Not Available | Positive | 219218 - 220090 | 32931.4 |
| duf397 domain-containing protein | CF165_01215 | Not Available | Positive | 220087 - 220257 | 5956.91 |
| hypothetical protein | CF165_01220 | Not Available | Negative | 220250 - 221020 | 26847.9 |
| sige family rna polymerase sigma factor | CF165_01225 | Not Available | Positive | 221158 - 221682 | 19773.6 |
| hypothetical protein | CF165_01230 | Not Available | Positive | 221682 - 222488 | 28635.3 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
