Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| udp-n-acetylglucosamine 2-epimerase (non-hydrolyzing) | CF165_00880 | Not Available | Negative | 162383 - 163534 | 40767.2 |
| peptidase | CF165_00885 | Not Available | Negative | 163581 - 163742 | 5655.99 |
| n-acetyl-glucosamine transferase | CF165_00890 | Not Available | Positive | 164145 - 165473 | 50231.9 |
| hypothetical protein | CF165_00895 | Not Available | Positive | 165517 - 165792 | 9841.57 |
| Trna-lys | Not Available | Not Available | Positive | 166072 - 166144 | Not Available |
| hypothetical protein | CF165_00905 | Not Available | Positive | 166256 - 166792 | 18948.7 |
| hypothetical protein | CF165_00910 | Not Available | Negative | 166847 - 167683 | 28240.3 |
| mini-circle protein | CF165_00915 | Not Available | Positive | 167896 - 168438 | 20415.9 |
| hypothetical protein | CF165_00920 | Not Available | Negative | 168443 - 169084 | 23696.0 |
| 3-carboxy-cis,cis-muconate cycloisomerase | CF165_00925 | Not Available | Positive | 169153 - 170679 | 51879.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
