Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| hypothetical protein | CF165_08980 | Not Available | Positive | 1843865 - 1844062 | 7350.49 |
| hypothetical protein | CF165_08985 | Not Available | Positive | 1844059 - 1844238 | 6564.64 |
| Major capsid protein | CF165_08990 | Not Available | Negative | 1844552 - 1845898 | 47709.1 |
| Capsid maturation protease | CF165_08995 | Not Available | Negative | 1846032 - 1846838 | 28823.5 |
| Portal protein | CF165_09000 | Not Available | Negative | 1846835 - 1848106 | 47082.0 |
| Hypothetical protein | CF165_09005 | Not Available | Negative | 1848106 - 1848393 | 10630.2 |
| Terminase large subunit | CF165_09010 | Not Available | Negative | 1848406 - 1850148 | 64255.1 |
| Small terminase | CF165_09015 | Not Available | Negative | 1850111 - 1850578 | 16860.0 |
| Gtp cyclohydrolase i | CF165_09020 | Not Available | Negative | 1850584 - 1851147 | 20178.1 |
| Quee-like queosine biosynthesis protein | CF165_09025 | Not Available | Negative | 1851144 - 1851809 | 23916.5 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
