Kingdom
Bacillati
Phylum
Actinomycetota
Class
Actinomycetes
Order
Pseudonocardiales
Family
Pseudonocardiaceae
Genus
Amycolatopsis
Description
Taxonomy
| Kingdom | Bacillati |
|---|---|
| Phylum | Actinomycetota |
| Class | Actinomycetes |
| Order | Pseudonocardiales |
| Family | Pseudonocardiaceae |
| Genus | Amycolatopsis |
| Species | Amycolatopsis vastitatis |
| Strain | strain H5 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Yes |
| Number of membranes | Not Available |
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Not Available |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1559501 bp
Thymine Count
1552639 bp
Guanine Count
3773259 bp
Cytosine Count
3784627 bp
Genome Length
10670026 bp
Protein-coding Genes
9498 genes
Non-Coding Genes
106 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| haloacid dehalogenase, type ii | CF165_00365 | Not Available | Positive | 67326 - 67949 | 21765.2 |
| nadp-dependent oxidoreductase | CF165_00370 | Not Available | Negative | 67946 - 68953 | 35355.3 |
| polyketide cyclase | CF165_00375 | Not Available | Negative | 69049 - 69483 | 15377.3 |
| marr family transcriptional regulator | CF165_00380 | Not Available | Positive | 69598 - 70071 | 17067.5 |
| sam-dependent methyltransferase | CF165_00385 | Not Available | Positive | 70113 - 70892 | 27998.3 |
| glycine/betaine abc transporter substrate-binding protein | CF165_00390 | Not Available | Negative | 70938 - 71858 | 32580.8 |
| glycine/betaine abc transporter permease | CF165_00395 | Not Available | Positive | 71997 - 72689 | 24798.0 |
| glycine/betaine abc transporter permease | CF165_00400 | Not Available | Positive | 72686 - 73396 | 25551.4 |
| cadmium transporter | CF165_00405 | Not Available | Negative | 73740 - 74303 | 18842.5 |
| gnat family n-acetyltransferase | CF165_00410 | Not Available | Positive | 74363 - 75298 | 34370.0 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.
Health Effects
No health effects information available for this bacterium.
