Kingdom
Pseudomonadati
Phylum
Pseudomonadota
Class
Gammaproteobacteria
Order
Pseudomonadales
Family
Pseudomonadaceae
Genus
Pseudomonas
Description
Taxonomy
| Kingdom | Pseudomonadati |
|---|---|
| Phylum | Pseudomonadota |
| Class | Gammaproteobacteria |
| Order | Pseudomonadales |
| Family | Pseudomonadaceae |
| Genus | Pseudomonas |
| Species | Pseudomonas avellanae |
| Strain | strain MAFF 212061 |
Profile
| Physiology | |
|---|---|
| Gram staining properties | Not Available |
| Shape | Not Available |
| Mobility | Not Available |
| Flagellar presence | Not Available |
| Number of membranes | Not Available |

Image source: Wikipedia/Wikimedia
| Ecology, Host, and Life Cycle | |
|---|---|
| Oxygen requirements | Not Available |
| Optimal temperature | Not Available |
| Temperature range | Not Available |
| Habitat | Not Available |
| Biotic relationship | Not Available |
| Host(s) | Corylus avellana |
| Cell arrangement | Not Available |
| Sporulation | Not Available |
| Energy source | Not Available |
| Pathogenicity | Not Available |
Gene Summary
Adenine Count
1414505 bp
Thymine Count
1419800 bp
Guanine Count
2003129 bp
Cytosine Count
2001236 bp
Genome Length
6999176 bp
Protein-coding Genes
5218 genes
Non-Coding Genes
111 genes
# of Chromosomes/Plasmids
1
Genes
| Name | Locus Tag | UniProt ID | Strand Orientation | Gene Start/End | Protein Molecular Weight |
|---|---|---|---|---|---|
| sarcosine oxidase subunit beta | CFN58_26405 | Not Available | Positive | 5152569 - 5153810 | 45154.3 |
| sarcosine oxidase subunit delta | CFN58_26410 | Not Available | Positive | 5153824 - 5154129 | 11652.6 |
| sarcosine oxidase | CFN58_26420 | Not Available | Positive | 5157033 - 5157605 | 20719.6 |
| methyl-accepting chemotaxis protein | CFN58_26425 | Not Available | Positive | 5157819 - 5159759 | 69681.5 |
| type vi secretion protein | CFN58_26440 | Not Available | Negative | 5161783 - 5162883 | 41450.3 |
| type vi secretion system protein impl | CFN58_26445 | Not Available | Negative | 5162880 - 5166695 | 141461.0 |
| type vi secretion system protein impk | CFN58_26455 | Not Available | Negative | 5167344 - 5168114 | 28842.5 |
| type vi secretion protein | CFN58_26465 | Not Available | Negative | 5169516 - 5169989 | 17702.4 |
| type vi secretion protein | CFN58_26470 | Not Available | Positive | 5170190 - 5170741 | 20240.1 |
| type vi secretion effector protein (hcp) | CFN58_26480 | Not Available | Positive | 5172339 - 5172836 | 17569.8 |
Pathways
0 pathways
No pathways found
No metabolic pathways have been associated with this bacterium yet.







